CDS

Accession Number TCMCG015C26799
gbkey CDS
Protein Id XP_027125106.1
Location join(3936060..3936290,3937532..3937631,3937870..3938023,3938593..3938743,3938854..3939002,3939372..3939472,3939596..3939753,3940251..3940365,3940490..3940827)
Gene LOC113741709
GeneID 113741709
Organism Coffea arabica

Protein

Length 498aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA506972
db_source XM_027269305.1
Definition signal recognition particle 54 kDa protein 2 [Coffea arabica]

EGGNOG-MAPPER Annotation

COG_category U
Description Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein)
KEGG_TC 3.A.5.1,3.A.5.2,3.A.5.7,3.A.5.8,3.A.5.9
KEGG_Module M00335        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko02044        [VIEW IN KEGG]
KEGG_ko ko:K03106        [VIEW IN KEGG]
EC 3.6.5.4        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko02024        [VIEW IN KEGG]
ko03060        [VIEW IN KEGG]
ko03070        [VIEW IN KEGG]
map02024        [VIEW IN KEGG]
map03060        [VIEW IN KEGG]
map03070        [VIEW IN KEGG]
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005786        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048500        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGTGTTAGCGCAATTAGGATCGAGCATCTCGCGTGCTCTTCAGCAGATGAGCAATGCGACAATCATCGATGAAAAAGTTCTTAACGAATGCCTCAACGAGATCACCAGGGCTTTGCTTCAAGCCGATGTTCAATTCAAACTTGTCCGAGATATGCAGACTAATATTAAAAAGATCGTCAATCTGGATGACCTCGCTGCTGGTCACAATAAGCGTAGGATTATCCAGCAGGCGATATTTAATGAGCTCTGCAAGATGCTGGATCCCGGAAAACCTTCATTCACCCCTAAGAAAGGCAAAACGAGTATCGTAATGTTTGTAGGATTGCAAGGGTCGGGCAAAACTACTACATGTACAAAATACGCGTACTACCACCAGAAGAAGGGCTGGAAACCTGCTTTGGTATGTGCTGATACATTTAGGGCTGGTGCTTTTGATCAGTTGAAGCAAAATGCAACAAAAGCTAAAATCCCCTTTTATGGAAGCTACATGGAGTCAGATCCGGTTAAAATAGCAGTTGAAGGTGTTGAAAGATTCAAGAAGGAAAACTGTGATCTTATAATTATTGACACCAGTGGACGCCACAAACAGGAAGCAGCCCTTTTTGAAGAGATGCGTCAAGTTTCCGAAGCAACTAATCCAGATCTTGTTATATTTGTCATGGATAGCAGTATCGGTCAGGCAGCTTTTGATCAAGCCCAAGCATTCAAGCAAAGTGTTGCAGTTGGAGCTGTTATTGTTACTAAAATGGATGGTCATGCAAAGGGAGGTGGTGCTCTTAGTGCGGTTGCAGCTACTAAAAGTCCTGTCATATTTATTGGGACTGGTGAACATATGGATGAATTTGAAGTTTTTGATGTAAAACCATTCGTAAGCCGTCTTTTAGGCATGGGTGACTGGTCTGGCTTCATGGACAAAATTCATGAAGTTGTCCCAATGGATCAACAGCCTGAGCTGCTTCAAAAGCTTTCTGAAGGAAATTTCACATTGAGGATTATGTACGAGCAATTCCAGAACATACTGAAAATGGGACCAATTGGACAGGTATTCTCAATGCTCCCAGGATTTAGTGCAGAGTTGATGCCAAAAGGTCATGAAAAAGAAAGCCAGGCAAAGATCAAACGCTACATGACAATGATGGATTCAATGACGAACGAAGAGTTGGATAGTTCCAATCCCAAGTTAATCAATGAATCACGGATAATGCGGATAGCAAGGGGGTCTGGTCGTCAAGTAAGAGAAGTGATGGAAATGTTCGAAGAGTACAAGCGCCTTGCCAAGATCTGGAGCAAGATGAAAGGACTCAAAATCCCAAAGAAGGGAGAAATGAGTGCCTTATCTCGAAATATGAACGCTCAGCACATGAGCAAAGTTCTCCCACCTCAGATGCTGAAGCAGATTGGTGGGATGGGAGGTCTGCAAAACTTGATGAAGCAAATGGGCTCGATGGGCTCTGCTAAAGAGATGATGGGGATGTTTGGAGGTGGAGATAAGTAG
Protein:  
MVLAQLGSSISRALQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVRDMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKTSIVMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFKKENCDLIIIDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSAELMPKGHEKESQAKIKRYMTMMDSMTNEELDSSNPKLINESRIMRIARGSGRQVREVMEMFEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQNLMKQMGSMGSAKEMMGMFGGGDK